Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015878223.1_cds_XP_016436709.1_32539
CDS Infomation

[gene=LOC107762827] [db_xref=GeneID:107762827] [protein=general transcription factor 3C polypeptide 5-like isoform X3] [protein_id=XP_016436709.1] [location=complement(join(190691..190743,190966..191161,193085..193223,199419..199517,199626..199797,205335..205377,207917..207974,208475..208565,208654..208743,208880..209246,209864..209998))] [gbkey=CDS]
Sequence

ATGGGGATTATAAAAGATGGTTCAGTATCAGGAATTTTACCCAGTAACAAGGTCTTTGCT
GTTCATTACCCTGCTTACCCTTCTTCAATGGAACGTGCCATTGAGACTCTTGGCGGCATT
CAAGGCATTGTCAAGGCTCGAACTTCACAGTCAAATAAGCTGGAGCTCCATTTCCGGCCA
GAAGATCCTTATTCACACCCTGCCTTTGGGGAGCTTAGGCATAGAAATAATTTCCTGTTG
AAAATATCCAAGACTAAAGTAAGGGATGTCGAAACCGCTGACAATAGTTGTGGAATATCG
ATGCAATCTTCAGGGAGTCCTGTTAATTGTGAACAAGAAATTTCTCGTGTTGAACATTCG
TTAGCTGCAGAAAAGGTGAATGAGTCTAGATGGTTATCTGCTGGTGCTTCAAAAGAATTT
GAAGTGCAGAATACTACAAAATTGCAGGTGCATCTCTCAGCTAATATTGTTTCTCATGTT
GCTGAAGCTTATCATTTTAATGGAATGGTAGACTATCAGCATGTTCTTGCCGTTCATGCT
GATGTTGCTAGAAGAAAAAAAAGACAGTGGGCAGAGGTGGAACCTAAATTTGAGAAGGGA
GGTCTTATGGATGTCGATCAGGAGGATTTGATGATTTTACTACCTCCTCTGTTTTCCTTA
AAAGATATGCCTGAGAATATTGTATTAAAATCACTTGCACCAAAAAGAAAACAAGAGGTG
CTTTACCGGCAAAATTGGGAGAGGGAGATGGAGCAGAGTCTTAACCTTGATGTTAATATC
AAAGAGATTCCTAAACCAGTGGATTGGGAAAAGCACATACTTCAGGGCTCAGAAGATTGG
AGACGGCAGAAGGTGGTATCTGAATTGTTTGAAGAGCGTCAAATATGGGTCAAAGAGTCA
TTAGCTGAGCGCTTGCGTGATGGGGGTCTGAAGCTTGGAGAGAGCAGGATCAAAAGGCTT
CTCTTTAGAGTAGCATATTACTTTTCGAGTGGGCCTTTCCGTAGATTCTGGATAAGGAAA
GGTTATGATCCTCGGAAGGATCCTGAATCCCGCATATTGAAACATAGATGGGATGATATA
TGTGCCTTCCGTGTTTTTCCGTATAAATGTCAGATATCATTGCAACTTTGTGAACTCAAG
GACAACTACATTCAACAAGAAATCAGAAAACCCTCAAATCAAGAAACTTGTGATAATACA
ACAGGATGGTTCTCCTCTCATATTCTTGATTGCTTGAGACTGTGCATTGCTGTGAGATTT
ATGTCAGTATGCCCTCATCCCGATGCAGAGTCTTTACTAAAAACTGTGTCTGCCCGCTTT
GAGAAGTCGAAGAGGATTCACACTTGTGTGAAAGTTACAAGATCTGAAGAGCAAGGAAAA
GTCCATAAAGCTAGTTGTCATTATAGTCACATCGGAGCCTTTACTCAAGTTTTTCTCCTA
TAA

Peptide Sequence

PEP ID

XP_016436709.1
PEP Infomation

PREDICTED: general transcription factor 3C polypeptide 5-like isoform X3 [Nicotiana tabacum]
Sequence

MGIIKDGSVSGILPSNKVFAVHYPAYPSSMERAIETLGGIQGIVKARTSQSNKLELHFRP
EDPYSHPAFGELRHRNNFLLKISKTKVRDVETADNSCGISMQSSGSPVNCEQEISRVEHS
LAAEKVNESRWLSAGASKEFEVQNTTKLQVHLSANIVSHVAEAYHFNGMVDYQHVLAVHA
DVARRKKRQWAEVEPKFEKGGLMDVDQEDLMILLPPLFSLKDMPENIVLKSLAPKRKQEV
LYRQNWEREMEQSLNLDVNIKEIPKPVDWEKHILQGSEDWRRQKVVSELFEERQIWVKES
LAERLRDGGLKLGESRIKRLLFRVAYYFSSGPFRRFWIRKGYDPRKDPESRILKHRWDDI
CAFRVFPYKCQISLQLCELKDNYIQQEIRKPSNQETCDNTTGWFSSHILDCLRLCIAVRF
MSVCPHPDAESLLKTVSARFEKSKRIHTCVKVTRSEEQGKVHKASCHYSHIGAFTQVFLL

Transcript Sequence

Gene sequence data has not been registered.